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Aparajita Khan

Aparajita Khan

I am an Assistant Professor in the Department of Computer Science and Engineering at the Indian Institute of Technology (BHU) Varanasi, India. I joined IIT (BHU) Varanasi in July 2025 after serving as an Assistant Professor at IIT Roorkee. Earlier, I worked as a Postdoctoral Scholar with the Departments of Neurosurgery and Medicine (Quantitative Sciences Unit) at Stanford University, where I continue to collaborate.

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Research Overview

My research focuses on development of machine learning methods to identify and analyze patterns embedded in complex large-scale datasets from different areas of biomedical sciences spanning single-cell and spatial transcriptomics, multi-omics integration, and medical natural language processing. I particularly emphasize on methodological paradigms of multi-view learning, subspace clustering, multi-graph fusion, and manifold learning.

Postdoctoral work at Stanford University

Large Language Modelling of Radiology and Pathology Reports for Lung Cancer Phenotyping

Highlighted Projects

Large Language Modelling of Electronic Health Records for Smoking Data Abstraction

npj Digital Medicine

Medical Natural Lang

JCO Clincal Cancer Informatics

Integrative Multi-omics for Cancer Subtype Analysis

Multi-omics cancer genomics

IEEE Transactions on Computational Biology and Bioinformatics

Get In Touch


Aparajita Khan
Assistant Professor, Department of Computer Science and Engineering 
Indian Institute of Technology (BHU) Varanasi

Collaborator, Quantitative Sciences Unit, Department of Medicine
Stanford University School of Medicine
Emails: aparajita.cse@iitbhu.ac.in, aparjita@stanford.edu 
Phone: +91-7384850465
Google Scholar    GitHub

  

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